Mini Desserts

Brownie-Bottom Mini Cheesecakes with Chocolate Ganache

Twelve individual cheesecakes on part-baked brownie bases, finished with poured ganache.

240 min · 12 mini cheesecakes · Oven

Small round layered desserts, each with a dark brownie base, a pale yellow cheesecake middle and a glossy chocolate ganache top scattered with chopped chocolate pieces

About Darleen

on Recipesdarleen

Darleen is a mom who turned her slow cooker into a lifesaver, sharing cozy, easy-to-make recipes that bring comfort to busy days.

268 recipes by Darleen Vance

Published May 10, 2026

How Recipesdarleen publishes recipes

The brownie base gets eight minutes alone in the muffin pan first. That short head start firms it enough to hold the cheesecake batter poured over it rather than blending into it.

After a second bake the cases chill for at least two hours, and only then does the ganache go on: warm cream poured over chopped chocolate, stirred smooth and spooned over each cold top.

Two Bakes and a Chill

The pan goes into the oven twice before anything is poured on top.

  1. Stage 1 of 3

    First bake

    Steps 2–3 of 6

    Brownie batter divided among the cups and baked 8 minutes to firm the bases.

    1. Brownie batter mixedMelt 4 oz chocolate with the butter. Whisk in 1/2 cup sugar, 1 egg and 1/2 tsp vanilla, then fold in the flour and salt.
    2. Bases part-bakedDivide the brownie batter among the cups and bake 8 minutes.
  2. Stage 2 of 3

    Second bake

    Steps 4–5 of 6

    Cheesecake batter poured over and baked 15 to 17 minutes to a slight wobble.

    1. Cheesecake batter beatenBeat the cream cheese with the cheesecake sugar until smooth. Beat in the 2 eggs one at a time and then the cheesecake vanilla.
    2. Second bakeDivide the cheesecake mixture over the brownie bases and bake 15 to 17 minutes, until the centres are set with a slight wobble.
  3. Stage 3 of 3

    Chill and finish

    Steps 6–6 of 6

    At least 2 hours cold, then ganache spooned over and chopped chocolate on top.

    1. Chilled, then ganachedCool, then refrigerate at least 2 hours. Heat the cream until steaming, pour over the ganache chocolate and stir smooth. Spoon over the chilled cheesecakes and finish with chopped chocolate.

How to Make It

  1. Pan lined, oven at 325°F

    Heat the oven to 325°F and line a 12-cup muffin pan with paper liners.

  2. Brownie batter mixed

    Melt 4 oz chocolate with the butter. Whisk in 1/2 cup sugar, 1 egg and 1/2 tsp vanilla, then fold in the flour and salt.

  3. Bases part-baked

    Divide the brownie batter among the cups and bake 8 minutes.

  4. Cheesecake batter beaten

    Beat the cream cheese with the cheesecake sugar until smooth. Beat in the 2 eggs one at a time and then the cheesecake vanilla.

  5. Second bake

    Divide the cheesecake mixture over the brownie bases and bake 15 to 17 minutes, until the centres are set with a slight wobble.

  6. Chilled, then ganached

    Cool, then refrigerate at least 2 hours. Heat the cream until steaming, pour over the ganache chocolate and stir smooth. Spoon over the chilled cheesecakes and finish with chopped chocolate.

Ingredient Notes

Semisweet chocolate, twice
Four ounces melted into the brownie base and another four for the ganache.
Cream cheese
Sixteen ounces with its own sugar, two eggs and vanilla for the middle layer.
Heavy cream
A third of a cup, heated until steaming and poured over the ganache chocolate.

Why This Recipe Works

  • Part-baking the brownie is what keeps three visible layers instead of a marbled middle.
  • Paper liners let each mini lift out cleanly without a springform.
  • A slight wobble at 15 to 17 minutes means the cheesecake sets as it cools rather than cracking.
  • Pouring ganache onto chilled cheesecake makes it set glossy almost immediately.

Success Tips

  • Divide the brownie batter with a spoon and level it; uneven bases give uneven layers.
  • Let the ganache cool for a minute before spooning so it sits on top rather than running down the sides.
  • Chill the full two hours before the ganache goes on, or it will slide off a warm surface.

Serving Ideas

Peel the liners back partly so all three layers show, and serve cold with the ganache still glossy.

Storage and Reheating

Refrigerate

Keep refrigerated at 40°F or below; the ganache stays set and the cheesecake firm.

Frequently Asked Questions

How do I keep the layers separate?

Bake the brownie bases for 8 minutes before the cheesecake batter goes on top.

When does the ganache go on?

After at least 2 hours of chilling, poured over the cold cheesecakes.

Recipesdarleen

Brownie-Bottom Mini Cheesecakes with Chocolate Ganache

Twelve individual cheesecakes on part-baked brownie bases, finished with poured ganache.

Prep
30 min
Cook
25 min
Total
240 min
Yield
12 mini cheesecakes

Oven

Equipment12-cup muffin pan · Paper liners · Electric mixer · Small saucepan

Before you startSoften the cream cheese and allow about four hours in total, most of it chilling before the ganache.

Ingredients

Instructions

  1. Heat the oven to 325°F and line a 12-cup muffin pan with paper liners.
  2. Melt 4 oz chocolate with the butter. Whisk in 1/2 cup sugar, 1 egg and 1/2 tsp vanilla, then fold in the flour and salt.
  3. Divide the brownie batter among the cups and bake for 8 minutes.
  4. Beat the cream cheese with the cheesecake sugar until smooth. Beat in the 2 eggs one at a time and then the cheesecake vanilla.
  5. Divide the cheesecake mixture over the brownie bases and bake for 15 to 17 minutes, until the centers are set with a slight wobble.
  6. Cool, then refrigerate for at least 2 hours. Heat the cream until steaming, pour over the ganache chocolate and stir smooth. Spoon over the chilled cheesecakes and finish with chopped chocolate.